Blogs

Reimagining open science as part of the climate movement Our 7th Openscapes Community Call featured a “celebrity interview” with Monica Granados, PhD. Monica is the Open Climate Campaign Manager at Creative Commons and on the Leadership team of PREreview. She is an open science specialist and a trained ecologist. Monica was interviewed by Julie Lowndes, PhD, Openscapes Director. Watch the recording on Openscapes YouTube. In this conversation, we dug into what each of us can do to connect our daily work to the climate movement.

NASA Openscapes: efforts to support end users in the journey to the cloud

By Amy Steiker, Alexis Hunzinger, Luis Lopez, Catalina Oaida Taglialatela, Aaron Friesz and the NASA Openscapes Mentors in community

December 12, 2022

We are a mentor community across NASA Earth science data centers (Distributed Active Archive Centers - DAACs). We are co-creating and teaching common tutorials to support researchers as they migrate analytical workflows to the Cloud. We presented at several workshops and events this fall, including a 25-minute talk at NASA EOSDIS Systems Engineering Technical Interchange Meeting (SE TIM) that we reused at NASA’s Open Source Science Data Repositories (OSSDR) Workshop. These presentations shared perspectives from the NASA Openscapes DAAC mentors that we have developed through collaborating across DAACs, developing teaching resources, teaching, and listening to feedback from learners, which we iterate from after each time.

Sound Bytes: Championing Open Science

By Kourtney Burger for NOAA Fisheries in community

December 9, 2022

This blog post is authored by Kourtney Burger and is cross-posted from the NOAA Fisheries Science blog. Kourtney works as a biological science technician with the SWFSC Acoustic Ecology Lab. She is responsible for the lab’s data management and general lab management and maintenance. Her current research interests include using passive acoustics monitoring as a non-invasive way to study marine mammals in their natural environments. When Kourtney’s not working, you can find her spending time outdoors and hanging out with her dog.

Adapting the Champions Program for the California Water Boards

By Corey Clatterbuck and Anna Holder in community

December 2, 2022

Note: Openscapes began to work with and onboard mentors over the summer of 2021 while also beginning writing the Openscapes Approach Guide to help document our process. This post focuses on what the California Water Boards mentors learned in 2022 as they led their own Cohort in the agency. This was the first Cohort to be “independently led” by mentors within their own agency, we hope the first of many! Thank you Corey and Anna for your continued and inspiring leadership in open and kinder science (and beyond).

The why, what, and how of our NASA Openscapes cloud infrastructure: 2i2c JupyterHub and corn environment

By Luis Lopez and the NASA Openscapes Mentors in community

November 17, 2022

The why, what, and how of our NASA Openscapes cloud infrastructure: 2i2c JupyterHub and corn environment I am a software engineer at the National Snow and Ice Data Center. Last month I gave a casual overview of our current cloud infrastructure set up with NASA Openscapes. The purpose was to share the why, what, and how of our setup with 2i2c JupyterHub and corn, to see how we can reuse what works and improve from other ideas.

Vacationing with Open Science

By Julie Lowndes in community

November 3, 2022

I’ve just taken a 2+ week vacation and truly unplugged. While this post seems a bit personal for the Openscapes blog, I wanted to share a bit about how our open science process made it possible, because one of the things we hear often from researchers is that they feel like they can’t take vacation - too much rests solely on their shoulders, solely on their laptops. And I have felt this way too, which was one reason why time off was a long time coming.

Aligning mission around collaborative practices, with researchers, supervisors, and IT

By Molly Stevens, Adyan Rios, Erica Rule in community

September 30, 2022

Note from Openscapes: This summer, we led a 2-month Champions Cohort with the National Oceanic and Atmospheric Administration (NOAA) Fisheries at the Southeast Fisheries Science Center, working with 40 staff and affiliates. These participants were from research teams, supervisors, and IT, and were interested in exploring new approaches to collaborating around complex workflows required in analyses and reports involving diverse teams, data flows, and analyses. This Cohort was organized and coordinated by Adyan Rios, Molly Stevens, and Erica Rule, following Adyan’s participation in the 2021 Fall NMFS Cohort and her leadership since, including leading Surf Sessions, feature stories, and contributing to broader NMFS-Openscapes efforts including presenting to NMFS leadership.

Quarto Keynote at the RStudio Conference

By Julie Lowndes in community

August 10, 2022

This is a brief post summarizing my co-keynote at rstudio::conf(2022), with Mine Cetinkaya-Rundel titled Hello Quarto: share, collaborate, teach, reimagine. All slides, demos, art, are available for reuse and remix! recording - rstudio.com/conference/2022/keynotes/collaborate-with-quarto slides - mine.quarto.pub/hello-quarto repo - github.com/mine-cetinkaya-rundel/hello-quarto art - https://twitter.com/allison_horst/status/1552693891706413056 twitter thread - https://twitter.com/juliesquid/status/1553527320308338688 At rstudio::conf(2022), I had the distinct honor to welcome folks to Quarto, which Openscapes has been using to collaborate and reimagine how we tackle inclusive environmental science & the climate crisis.

Learning by doing: migrating to Quarto from Bookdown

By Stefanie Butland, Ileana Fenwick in community

July 21, 2022

Learning by doing: migrating to Quarto from Bookdown I just had rather a lot of fun working with Ileana Fenwick to convert a book to Quarto from RMarkdown! Given that Quarto is relatively new and there’s not yet an excess of resources beyond the official docs, we’ve documented how we did it. First, what is Quarto? It is a new open-source scientific and technical publishing system, building on ten years of what RStudio learned from RMarkdown, and extends these features beyond R.

Hello Quarto! A Chat with NASA Openscapes, co-hosted with R-Ladies Santa Barbara

By Sam Csik, Julie Lowndes, Amy Steiker, Catalina Oaida Taglialatela, Aaron Friesz, J.J. Allaire, Erin Robinson, Stefanie Butland in community

June 22, 2022

Hello Quarto! A Quarto Chat with NASA Openscapes, co-hosted with R-Ladies Santa Barbara Our 6th Openscapes Community Call co-hosted with R-Ladies Santa Barbara featured a “celebrity interview” with NASA Openscapes Mentors Amy Steiker, Catalina Oaida Taglialatela, Aaron Friesz, with J.J. Allaire, lead Quarto developer and CEO of RStudio. The conversation was led by Sam Csik of R-Ladies Santa Barbara. Quarto is an open-source scientific and technical publishing system built on Pandoc that allows users to create dynamic documents, presentations, websites, and more.

Open Science for the Climate Movement, a chat with Dr Monica Granados

NASA Openscapes: efforts to support end users in the journey to the cloud

Sound Bytes: Championing Open Science

Adapting the Champions Program for the California Water Boards

The why, what, and how of our NASA Openscapes cloud infrastructure: 2i2c JupyterHub and corn environment

Vacationing with Open Science

Aligning mission around collaborative practices, with researchers, supervisors, and IT

Quarto Keynote at the RStudio Conference

Learning by doing: migrating to Quarto from Bookdown

Hello Quarto! A Chat with NASA Openscapes, co-hosted with R-Ladies Santa Barbara

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